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TMTC4 transmembrane O-mannosyltransferase targeting cadherins 4 [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102744713, updated on 10-Mar-2024

Summary

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Gene symbol
TMTC4
Gene description
transmembrane O-mannosyltransferase targeting cadherins 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See TMTC4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006383362.1 (4276..19845)

NW_006383362.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115940438 Neighboring gene gamma-glutamylamine cyclotransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006383362 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC4
Names
transmembrane and tetratricopeptide repeat containing 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006383362.1 Reference LepWed1.0 Primary Assembly

    Range
    4276..19845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006731844.1 → XP_006731907.1  protein O-mannosyl-transferase TMTC4

    UniProtKB/TrEMBL
    A0A2U3XKA1
    Conserved Domains (3) summary
    TIGR02521
    Location:257 → 386
    type_IV_pilW; type IV pilus biogenesis/stability protein PilW
    sd00006
    Location:265 → 293
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:75 → 149
    DUF1736; Domain of unknown function (DUF1736)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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