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B4GALT4 beta-1,4-galactosyltransferase 4 [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102743563, updated on 10-Mar-2024

Summary

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Gene symbol
B4GALT4
Gene description
beta-1,4-galactosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See B4GALT4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006383261.1 (369406..394594)

NW_006383261.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene Rho GTPase activating protein 31 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC115939933 Neighboring gene uroplakin 1B Neighboring gene testis expressed 55

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006383261 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006383261.1 Reference LepWed1.0 Primary Assembly

    Range
    369406..394594
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006730424.2 → XP_006730487.1  beta-1,4-galactosyltransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A2U3XG77
    Conserved Domains (1) summary
    cd00899
    Location:122 → 339
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

  2. XM_031024936.1 → XP_030880796.1  beta-1,4-galactosyltransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A7F8QJ92
    Conserved Domains (2) summary
    pfam13733
    Location:77 → 208
    Glyco_transf_7N; N-terminal region of glycosyl transferase group 7
    cl11394
    Location:213 → 245
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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