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PYGL glycogen phosphorylase L [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102738860, updated on 10-Mar-2024

Summary

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Gene symbol
PYGL
Gene description
glycogen phosphorylase L
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See PYGL in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006383309.1 (854612..920810, complement)

NW_006383309.1Genomic Context describing neighboring genes Neighboring gene ninein Neighboring gene uncharacterized LOC115940181 Neighboring gene abhydrolase domain containing 12B Neighboring gene tripartite motif containing 9 Neighboring gene E3 ubiquitin-protein ligase TRIM9-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006383309 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen phosphorylase, liver form
Names
phosphorylase, glycogen, liver

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006383309.1 Reference LepWed1.0 Primary Assembly

    Range
    854612..920810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006731123.2 → XP_006731186.2  glycogen phosphorylase, liver form isoform X5

    UniProtKB/TrEMBL
    A0A2U3XIB3
    Conserved Domains (1) summary
    cd04300
    Location:29 → 827
    GT35_Glycogen_Phosphorylase; glycogen phosphorylase and similar proteins

  2. XM_031025707.1 → XP_030881567.1  glycogen phosphorylase, liver form isoform X1

    UniProtKB/TrEMBL
    A0A7F8QK17
    Conserved Domains (1) summary
    cd04300
    Location:29 → 842
    GT35_Glycogen_Phosphorylase; glycogen phosphorylase and similar proteins

  3. XM_031025710.1 → XP_030881570.1  glycogen phosphorylase, liver form isoform X4

    UniProtKB/TrEMBL
    A0A7F8QK41

  4. XM_031025709.1 → XP_030881569.1  glycogen phosphorylase, liver form isoform X3

    UniProtKB/TrEMBL
    A0A7F8QK12

  5. XM_031025708.1 → XP_030881568.1  glycogen phosphorylase, liver form isoform X2

    UniProtKB/TrEMBL
    A0A7F8QMX3

RNA

  1. XR_004074982.1 RNA Sequence

  2. XR_004074983.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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