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KIRREL3 kirre like nephrin family adhesion molecule 3 [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102736647, updated on 10-Mar-2024

Summary

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Gene symbol
KIRREL3
Gene description
kirre like nephrin family adhesion molecule 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See KIRREL3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006383328.1 (1352365..1474724, complement)

NW_006383328.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115940262 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4 Neighboring gene uncharacterized LOC102736440 Neighboring gene uncharacterized LOC102736243

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006383328 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3
Names
kin of IRRE like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006383328.1 Reference LepWed1.0 Primary Assembly

    Range
    1352365..1474724 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031025951.1 → XP_030881811.1  kin of IRRE-like protein 3 isoform X4

    UniProtKB/TrEMBL
    A0A7F8QM02
    Conserved Domains (4) summary
    cd05759
    Location:132 → 213
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:385 → 482
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00409
    Location:21 → 110
    IG; Immunoglobulin
    cl11960
    Location:302 → 383
    Ig; Immunoglobulin domain

  2. XM_031025950.1 → XP_030881810.1  kin of IRRE-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A7F8QKS5
    Conserved Domains (4) summary
    cd05759
    Location:132 → 213
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:385 → 482
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00409
    Location:21 → 110
    IG; Immunoglobulin
    cl11960
    Location:302 → 383
    Ig; Immunoglobulin domain

  3. XM_006731335.2 → XP_006731398.1  kin of IRRE-like protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A2U3XJ86
    Conserved Domains (4) summary
    cd05759
    Location:132 → 213
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:385 → 482
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00410
    Location:21 → 110
    IG_like; Immunoglobulin like
    cl11960
    Location:302 → 383
    Ig; Immunoglobulin domain

  4. XM_031025949.1 → XP_030881809.1  kin of IRRE-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A7F8QKT2
    Conserved Domains (4) summary
    cd05759
    Location:132 → 213
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:385 → 482
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00410
    Location:21 → 110
    IG_like; Immunoglobulin like
    cl11960
    Location:302 → 383
    Ig; Immunoglobulin domain
Nucleotide Protein
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