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FUCA2 alpha-L-fucosidase 2 [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102735997, updated on 10-Mar-2024

Summary

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Gene symbol
FUCA2
Gene description
alpha-L-fucosidase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See FUCA2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006385006.1 (109874..128241, complement)

NW_006385006.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase tRNA specific 2 Neighboring gene 40S ribosomal protein S21 pseudogene Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene uncharacterized LOC115944844 Neighboring gene V-type proton ATPase subunit E 1 pseudogene Neighboring gene phosphatase and actin regulator 2 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006385006 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-fucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma alpha-L-fucosidase
Names
fucosidase, alpha-L- 2, plasma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006385006.1 Reference LepWed1.0 Primary Assembly

    Range
    109874..128241 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006745190.2 → XP_006745253.1  plasma alpha-L-fucosidase

    UniProtKB/TrEMBL
    A0A2U3YNU7
    Conserved Domains (2) summary
    smart00812
    Location:33 → 413
    Alpha_L_fucos; Alpha-L-fucosidase
    pfam16757
    Location:376 → 464
    Fucosidase_C; Alpha-L-fucosidase C-terminal domain
Nucleotide Protein
Heading Accession and Version

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