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FUT4 fucosyltransferase 4 [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102732303, updated on 10-Mar-2024

Summary

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Gene symbol
FUT4
Gene description
fucosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See FUT4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006384369.1 (238169..247413, complement)

NW_006384369.1Genomic Context describing neighboring genes Neighboring gene piwi like RNA-mediated gene silencing 4 Neighboring gene prohibitin-2 pseudogene Neighboring gene chromosome unknown C11orf97 homolog Neighboring gene splicing factor 45 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006384369 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: alpha-(1,3)-fucosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006384369.1 Reference LepWed1.0 Primary Assembly

    Range
    238169..247413 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006752546.2 → XP_006752609.1  LOW QUALITY PROTEIN: alpha-(1,3)-fucosyltransferase 4

    UniProtKB/TrEMBL
    A0A2U3Z9E7
    Conserved Domains (2) summary
    pfam00852
    Location:362 → 534
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:196 → 340
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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