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CPTP ceramide-1-phosphate transfer protein [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102726577, updated on 10-Mar-2024

Summary

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Gene symbol
CPTP
Gene description
ceramide-1-phosphate transfer protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See CPTP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006383401.1 (981044..984970, complement)

NW_006383401.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115940628 Neighboring gene matrix remodeling associated 8 Neighboring gene dishevelled segment polarity protein 1 Neighboring gene taste 1 receptor member 3 Neighboring gene integrator complex subunit 11 Neighboring gene 40S ribosomal protein S23 pseudogene Neighboring gene pseudouridine synthase like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006383401 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide 1-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ceramide 1-phosphate transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermembrane lipid transfer IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide-1-phosphate transfer protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006383401.1 Reference LepWed1.0 Primary Assembly

    Range
    981044..984970 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006732419.2 → XP_006732482.1  ceramide-1-phosphate transfer protein

    UniProtKB/TrEMBL
    A0A2U3XLY6
    Conserved Domains (1) summary
    pfam08718
    Location:30 → 176
    GLTP; Glycolipid transfer protein (GLTP)

  2. XM_031027127.1 → XP_030882987.1  ceramide-1-phosphate transfer protein

    UniProtKB/TrEMBL
    A0A2U3XLY6
    Conserved Domains (1) summary
    pfam08718
    Location:30 → 176
    GLTP; Glycolipid transfer protein (GLTP)

  3. XM_031027128.1 → XP_030882988.1  ceramide-1-phosphate transfer protein

    UniProtKB/TrEMBL
    A0A2U3XLY6
    Conserved Domains (1) summary
    pfam08718
    Location:30 → 176
    GLTP; Glycolipid transfer protein (GLTP)
Nucleotide Protein
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