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RFT1 RFT1 homolog [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102725652, updated on 10-Mar-2024

Summary

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Gene symbol
RFT1
Gene description
RFT1 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See RFT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006385480.1 (204005..271246)

NW_006385480.1Genomic Context describing neighboring genes Neighboring gene decapping mRNA 1A Neighboring gene 60S ribosomal protein L10-like Neighboring gene transketolase Neighboring gene protein kinase C delta type

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006385480 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein RFT1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006385480.1 Reference LepWed1.0 Primary Assembly

    Range
    204005..271246
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006747063.2 → XP_006747126.2  protein RFT1 homolog

    UniProtKB/TrEMBL
    A0A2U3YTS8
    Conserved Domains (1) summary
    cl09326
    Location:27 → 256
    MATE_like; Multidrug and toxic compound extrusion family and similar proteins
Nucleotide Protein
Heading Accession and Version

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