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LOC102724200 trafficking protein particle complex subunit 10-like [ Homo sapiens (human) ]

Gene ID: 102724200, updated on 10-Oct-2023

Summary

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Gene symbol
LOC102724200
Gene description
trafficking protein particle complex subunit 10-like
See related
Ensembl:ENSG00000280433
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Annotation information
Annotation category: partial on reference assembly
Note: GeneID:102724200 is on a scaffold that is thought to be a false duplication and thus this gene is likely redundant with GeneID:7109. [11 Jun 2021]
Expression
Ubiquitous expression in lymph node (RPKM 12.0), spleen (RPKM 10.4) and 25 other tissues See more
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Genomic context

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See LOC102724200 in Genome Data Viewer
Location:
21p12
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (5155774..5165464, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene glutamine amidotransferase class 1 domain containing 3B Neighboring gene periodic tryptophan protein 2 homolog Neighboring gene uncharacterized LOC105379488 Neighboring gene long intergenic non-protein coding RNA 1670

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000021.9 Chromosome 21 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

General protein information

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Preferred Names
trafficking protein particle complex subunit 10-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    5155774..5165464 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011546082.4 → XP_011544384.4  trafficking protein particle complex subunit 10-like

    Related
    ENST00000623998.1
Nucleotide Protein
Heading Accession and Version

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