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FLVCR2-AS1 FLVCR2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 102724153, updated on 10-Oct-2023

Summary

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Official Symbol
FLVCR2-AS1provided by HGNC
Official Full Name
FLVCR2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55854
See related
Ensembl:ENSG00000224721 AllianceGenome:HGNC:55854
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in small intestine (RPKM 8.9), duodenum (RPKM 5.9) and 19 other tissues See more
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Genomic context

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Location:
14q24.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (75574901..75579588, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (69784017..69788704, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (76041244..76045931, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8752 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8753 Neighboring gene basic leucine zipper ATF-like transcription factor Neighboring gene ReSE screen-validated silencer GRCh37_chr14:76004983-76005197 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8754 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8755 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8756 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8757 Neighboring gene uncharacterized LOC107984653 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8758 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8759 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8760 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5949 Neighboring gene FLVCR choline and putative heme transporter 2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:76068843-76069722 Neighboring gene ribosomal protein S24 pseudogene 2 Neighboring gene RNA, 5S ribosomal pseudogene 387

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Clone Names

  • AC007182.6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110552.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC007182
    Related
    ENST00000455232.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    75574901..75579588 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    69784017..69788704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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