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LOC102724034 uncharacterized LOC102724034 [ Homo sapiens (human) ]

Gene ID: 102724034, updated on 10-Oct-2023

Summary

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Gene symbol
LOC102724034
Gene description
uncharacterized LOC102724034
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 1.8), endometrium (RPKM 0.9) and 17 other tissues See more
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Genomic context

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Location:
15q25.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (82443332..82444869, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (80307464..80309001, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (83112062..83113589, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene golgin A6 family like 9 Neighboring gene H3K4me1 hESC enhancers GRCh37_chr15:83109001-83109502 and GRCh37_chr15:83006785-83007776 Neighboring gene dynamin 1 pseudogene 36 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:83114659-83115163 Neighboring gene UBE2Q2 pseudogene 6 Neighboring gene hESC enhancers GRCh37_chr15:82988342-82989330 and GRCh37_chr15:83127113-83127972 Neighboring gene chondroitin sulfate proteoglycan 4 pseudogene 10 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:83137289-83137789

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120378.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC243919

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    82443332..82444869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187606.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    232417..233944 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    80307464..80309001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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