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LOC102723948 uncharacterized LOC102723948 [ Homo sapiens (human) ]

Gene ID: 102723948, updated on 17-Sep-2024

Summary

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Gene symbol
LOC102723948
Gene description
uncharacterized LOC102723948
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC102723948 in Genome Data Viewer
Location:
9q34.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (135162461..135167123)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (147386199..147390732)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902303 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:137914415-137915055 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137921403-137921903 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137961741-137962638 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:137977814-137978674 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:137978675-137979535 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137980170-137980974 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137980975-137981778 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:137983799-137983956 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137989975-137990476 Neighboring gene olfactomedin 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137997243-137997767 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137997768-137998293 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137998819-137999344 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138000081-138000642 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138000643-138001202 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138007797-138008496 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138017982-138018648 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138018649-138019315 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138025969-138026770 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:138028163-138028906 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:138028907-138029652 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138057350-138057850 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138062007-138062508 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:138064860-138065360 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138066123-138066624 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138078411-138079170 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138079171-138079930 Neighboring gene uncharacterized LOC401557 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr9:138089981-138090638 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr9:138090639-138091296 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:138110575-138111150 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138111151-138111726 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:138111727-138112301 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29292 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:138114640-138115217 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:138115797-138116374 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:138116375-138116952 Neighboring gene uncharacterized LOC107987138 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:138142531-138143102

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    135162461..135167123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_930423.2 RNA Sequence

  2. XR_001746585.2 RNA Sequence

  3. XR_428610.2 RNA Sequence

  4. XR_930425.1 RNA Sequence

  5. XR_001746584.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    147386199..147390732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080114.1 RNA Sequence

  2. XR_007080118.1 RNA Sequence

  3. XR_007080115.1 RNA Sequence

  4. XR_007080116.1 RNA Sequence

  5. XR_007080117.1 RNA Sequence

Nucleotide Protein
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