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LOC102723561 uncharacterized LOC102723561 [ Homo sapiens (human) ]

Gene ID: 102723561, updated on 27-Aug-2024

Summary

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Gene symbol
LOC102723561
Gene description
uncharacterized LOC102723561
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
5p14.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (21138092..21176356, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (21140085..21349674, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374678 Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 8 Neighboring gene uncharacterized LOC124900950 Neighboring gene MPRA-validated peak5181 silencer Neighboring gene uncharacterized LOC124900951 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:21325279-21325852 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr5:21471616-21472269 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:21481591-21482218 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:21482219-21482846 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:21484729-21485355 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:21485356-21485982 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr5:21485983-21486609 Neighboring gene H3K27ac hESC enhancer GRCh37_chr5:21494970-21495648 Neighboring gene GUSB pseudogene 1 Neighboring gene uncharacterized LOC124900949

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    21138092..21176356 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001742404.1 RNA Sequence

  2. XR_001742405.1 RNA Sequence

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_009646199.1 Reference GRCh38.p14 PATCHES

    Range
    39746..78010 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_427687.3 RNA Sequence

  2. XR_953204.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    21140085..21349674 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007075522.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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