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LOC102723324 uncharacterized LOC102723324 [ Homo sapiens (human) ]

Gene ID: 102723324, updated on 22-Oct-2024

Summary

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Gene symbol
LOC102723324
Gene description
uncharacterized LOC102723324
See related
Ensembl:ENSG00000227355
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC102723324 in Genome Data Viewer
Location:
9q33.2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (121369893..121463371)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (133565883..133659397)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (124132171..124225649)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene gelsolin Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28921 Neighboring gene ATPase H+ transporting V1 subunit B2 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:124023585-124024084 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20233 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:124043752-124044951 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:124047035-124047535 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr9:124048350-124049549 Neighboring gene Sharpr-MPRA regulatory region 178 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:124056667-124057289 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:124061747-124062407 Neighboring gene GSN antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:124089303-124090216 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28922 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:124132533-124133493 Neighboring gene stomatin Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:124148517-124149463 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:124215525-124216026 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:124216027-124216526 Neighboring gene NANOG hESC enhancer GRCh37_chr9:124234601-124235163 Neighboring gene glycoprotein alpha-galactosyltransferase 1 (inactive) Neighboring gene Sharpr-MPRA regulatory region 3911 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20236 Neighboring gene RNA, 7SL, cytoplasmic 187, pseudogene Neighboring gene high mobility group box 1 pseudogene 37

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_187150.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359644

  2. NR_187151.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359644

  3. NR_187152.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359644

  4. NR_187153.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359644
    Related
    ENST00000685727.2

  5. NR_187154.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359644

  6. NR_187155.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359644

  7. NR_187156.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359644

  8. NR_187157.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359644

  9. NR_187158.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359644

  10. NR_187159.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359644
    Related
    ENST00000658975.2

  11. NR_187160.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL359644

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    121369893..121463371
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    133565883..133659397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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