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LOC102721200 mitochondrial carnitine/acylcarnitine carrier-like protein [ Oryza brachyantha (malo sina) ]

Gene ID: 102721200, updated on 7-Dec-2023

Summary

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Gene symbol
LOC102721200
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza brachyantha
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Genomic context

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See LOC102721200 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ObraRS2 (GCF_000231095.2) 10 NC_023172.2 (15925539..15928546, complement)
101 previous assembly Oryza_brachyantha.v1.4b (GCF_000231095.1) 10 NC_023172.1 (14241096..14244328, complement)

Chromosome 10 - NC_023172.2Genomic Context describing neighboring genes Neighboring gene abscisic acid receptor PYL10-like Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene mitochondrial carnitine/acylcarnitine carrier-like protein Neighboring gene 60S ribosomal export protein NMD3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza brachyantha Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ObraRS2 Primary Assembly

Genomic

  1. NC_023172.2 Reference ObraRS2 Primary Assembly

    Range
    15925539..15928546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040528164.1 → XP_040384098.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X2

    UniProtKB/TrEMBL
    J3N550
    Conserved Domains (1) summary
    PTZ00169
    Location:167 → 314
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

  2. XM_040528163.1 → XP_040384097.1  mitochondrial carnitine/acylcarnitine carrier-like protein isoform X1

    UniProtKB/TrEMBL
    J3N550
    Conserved Domains (1) summary
    PTZ00169
    Location:172 → 319
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
Nucleotide Protein
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