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LOC102709506 mitochondrial arginine transporter BAC1 [ Oryza brachyantha (malo sina) ]

Gene ID: 102709506, updated on 7-Dec-2023

Summary

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Gene symbol
LOC102709506
Gene description
mitochondrial arginine transporter BAC1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza brachyantha
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Genomic context

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See LOC102709506 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ObraRS2 (GCF_000231095.2) 11 NC_023173.2 (8701382..8709599)
101 previous assembly Oryza_brachyantha.v1.4b (GCF_000231095.1) 11 NC_023173.1 (7500139..7508349)

Chromosome 11 - NC_023173.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121055715 Neighboring gene uncharacterized LOC107305230 Neighboring gene serine carboxypeptidase-like 18 Neighboring gene uncharacterized LOC102710348

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza brachyantha Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ObraRS2 Primary Assembly

Genomic

  1. NC_023173.2 Reference ObraRS2 Primary Assembly

    Range
    8701382..8709599
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015842036.2 → XP_015697522.1  mitochondrial arginine transporter BAC1 isoform X1

    UniProtKB/TrEMBL
    J3N7T8
    Conserved Domains (1) summary
    pfam00153
    Location:7 → 99
    Mito_carr; Mitochondrial carrier protein

  2. XM_006663324.3 → XP_006663387.1  mitochondrial arginine transporter BAC1 isoform X1

    UniProtKB/TrEMBL
    J3N7T8
    Conserved Domains (1) summary
    pfam00153
    Location:7 → 99
    Mito_carr; Mitochondrial carrier protein

  3. XM_015842037.2 → XP_015697523.1  mitochondrial arginine transporter BAC1 isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:97 → 184
    Mito_carr; Mitochondrial carrier protein

RNA

  1. XR_005812798.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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