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slc25a20 solute carrier family 25 member 20 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102697491, updated on 21-Oct-2024

Summary

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Gene symbol
slc25a20
Gene description
solute carrier family 25 member 20
See related
Ensembl:ENSLOCG00000014407
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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See slc25a20 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_09 current fLepOcu1.hap2 (GCF_040954835.1) 4 NC_090699.1 (65619183..65623992)
101 previous assembly LepOcu1 (GCF_000242695.1) Linkage Group LG5 NC_023183.1 (50323677..50328607)

Chromosome 4 - NC_090699.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC138238457 Neighboring gene ariadne homolog 2 (Drosophila) Neighboring gene rab GDP dissociation inhibitor beta Neighboring gene uncharacterized LOC138238458 Neighboring gene cAMP-dependent protein kinase type II-alpha regulatory subunit Neighboring gene inositol hexakisphosphate kinase 2a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040954835.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLepOcu1.hap2

Genomic

  1. NC_090699.1 Reference fLepOcu1.hap2

    Range
    65619183..65623992
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_069189595.1 → XP_069045696.1  mitochondrial carnitine/acylcarnitine carrier protein

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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