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b3galt1b UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1b [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102694827, updated on 10-Mar-2024

Summary

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Gene symbol
b3galt1b
Gene description
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1b
See related
Ensembl:ENSLOCG00000017831
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Also known as
b3galt1
Orthologs
human zebrafish all
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Genomic context

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See b3galt1b in Genome Data Viewer
Location:
chromosome: LG12
Exon count:
8
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG12 NC_023190.1 (17470500..17580361, complement)

Linkage Group LG12 - NC_023190.1Genomic Context describing neighboring genes Neighboring gene ceramide synthase 6 Neighboring gene serine threonine kinase 39 Neighboring gene uncharacterized LOC107078800 Neighboring gene xin actin binding repeat containing 2b Neighboring gene cysteine-serine-rich nuclear protein 3 Neighboring gene UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023190.1 Chromosome LG12 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023190.1 Reference LepOcu1 Primary Assembly

    Range
    17470500..17580361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015359054.1 → XP_015214540.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    W5NMS5
    Conserved Domains (1) summary
    pfam01762
    Location:93 → 280
    Galactosyl_T; Galactosyltransferase

  2. XM_015359052.1 → XP_015214538.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    W5NMS5
    Conserved Domains (1) summary
    pfam01762
    Location:93 → 280
    Galactosyl_T; Galactosyltransferase

  3. XM_015359049.1 → XP_015214535.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    W5NMS5
    Conserved Domains (1) summary
    pfam01762
    Location:93 → 280
    Galactosyl_T; Galactosyltransferase

  4. XM_015359050.1 → XP_015214536.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    W5NMS5
    Conserved Domains (1) summary
    pfam01762
    Location:93 → 280
    Galactosyl_T; Galactosyltransferase

  5. XM_015359051.1 → XP_015214537.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    W5NMS5
    Conserved Domains (1) summary
    pfam01762
    Location:93 → 280
    Galactosyl_T; Galactosyltransferase

  6. XM_015359055.1 → XP_015214541.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    W5NMS5
    Conserved Domains (1) summary
    pfam01762
    Location:93 → 280
    Galactosyl_T; Galactosyltransferase

  7. XM_015359056.1 → XP_015214542.1  beta-1,3-galactosyltransferase 1

    UniProtKB/TrEMBL
    W5NMS5
    Related
    ENSLOCP00000021934.1, ENSLOCT00000021973.1
    Conserved Domains (1) summary
    pfam01762
    Location:93 → 280
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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