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ctbp1 C-terminal binding protein 1 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102692404, updated on 10-Mar-2024

Summary

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Gene symbol
ctbp1
Gene description
C-terminal binding protein 1
See related
Ensembl:ENSLOCG00000009571
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
zebrafish all
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Genomic context

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See ctbp1 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
13
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG6 NC_023184.1 (22474797..22488840, complement)

Linkage Group LG6 - NC_023184.1Genomic Context describing neighboring genes Neighboring gene lysine (K)-specific demethylase 3B Neighboring gene spondin 2a, extracellular matrix protein Neighboring gene family with sequence similarity 53 member C Neighboring gene cell division cycle 25C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023184.1 Chromosome LG6 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023184.1 Reference LepOcu1 Primary Assembly

    Range
    22474797..22488840 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006631699.2 → XP_006631762.1  C-terminal-binding protein 1-like isoform X1

    UniProtKB/TrEMBL
    W5MTJ2
    Related
    ENSLOCP00000011701.1, ENSLOCT00000011719.1
    Conserved Domains (2) summary
    COG0111
    Location:61 → 362
    SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_015349399.1 → XP_015204885.1  C-terminal-binding protein 1-like isoform X1

    UniProtKB/TrEMBL
    W5MTJ2
    Conserved Domains (2) summary
    COG0111
    Location:61 → 362
    SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_015349400.1 → XP_015204886.1  C-terminal-binding protein 1-like isoform X2

    UniProtKB/TrEMBL
    W5MTJ2
    Conserved Domains (2) summary
    COG0111
    Location:44 → 345
    SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

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