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cep104 centrosomal protein 104 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102690444, updated on 21-Oct-2024

Summary

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Gene symbol
cep104
Gene description
centrosomal protein 104
See related
Ensembl:ENSLOCG00000005920
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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See cep104 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_09 current fLepOcu1.hap2 (GCF_040954835.1) 25 NC_090720.1 (3852678..3885813, complement)
101 previous assembly LepOcu1 (GCF_000242695.1) Linkage Group LG25 NC_023203.1 (10578565..10611729)

Chromosome 25 - NC_090720.1Genomic Context describing neighboring genes Neighboring gene chromosome 25 C1orf174 homolog Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, like Neighboring gene leucine rich repeat containing 47 Neighboring gene small integral membrane protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040954835.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLepOcu1.hap2

Genomic

  1. NC_090720.1 Reference fLepOcu1.hap2

    Range
    3852678..3885813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015337170.2 → XP_015192656.2  centrosomal protein of 104 kDa isoform X3

  2. XM_015337168.2 → XP_015192654.2  centrosomal protein of 104 kDa isoform X1

  3. XM_015337169.2 → XP_015192655.2  centrosomal protein of 104 kDa isoform X2

  4. XM_015337171.2 → XP_015192657.2  centrosomal protein of 104 kDa isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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