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mgat4c mgat4 family member C [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102687023, updated on 21-Oct-2024

Summary

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Gene symbol
mgat4c
Gene description
mgat4 family member C
See related
Ensembl:ENSLOCG00000016347
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
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Genomic context

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See mgat4c in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_09 current fLepOcu1.hap2 (GCF_040954835.1) 7 NC_090702.1 (17817768..18107450)
101 previous assembly LepOcu1 (GCF_000242695.1) Linkage Group LG8 NC_023186.1 (32238758..32524663, complement)

Chromosome 7 - NC_090702.1Genomic Context describing neighboring genes Neighboring gene transmembrane O-mannosyltransferase targeting cadherins 3 Neighboring gene centrosomal protein 290 Neighboring gene RNA 5'-phosphate and 3'-OH ligase 1 Neighboring gene uncharacterized LOC107078031 Neighboring gene Ras association domain family member 9 Neighboring gene neurotensin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040954835.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLepOcu1.hap2

Genomic

  1. NC_090702.1 Reference fLepOcu1.hap2

    Range
    17817768..18107450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_069192227.1 → XP_069048328.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

  2. XM_069192228.1 → XP_069048329.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

  3. XM_069192229.1 → XP_069048330.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

  4. XM_015352707.2 → XP_015208193.2  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

  5. XM_069192230.1 → XP_069048331.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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