U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tjp2b tight junction protein 2b (zona occludens 2) [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 102686926, updated on 21-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
tjp2b
Gene description
tight junction protein 2b (zona occludens 2)
See related
Ensembl:ENSLOCG00000009431
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Also known as
tjp2
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See tjp2b in Genome Data Viewer
Location:
chromosome: 3
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2024_09 current fLepOcu1.hap2 (GCF_040954835.1) 3 NC_090698.1 (57830057..57902223)
101 previous assembly LepOcu1 (GCF_000242695.1) Linkage Group LG2 NC_023180.1 (33144661..33207684)

Chromosome 3 - NC_090698.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol 4-phosphate 5-kinase type-1 beta Neighboring gene frataxin Neighboring gene family with sequence similarity 189 member A2 Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 1a Neighboring gene protein prenyltransferase alpha subunit repeat containing 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tight junction protein ZO-2b
Names
tight junction protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_040954835.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLepOcu1.hap2

Genomic

  1. NC_090698.1 Reference fLepOcu1.hap2

    Range
    57830057..57902223
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_069187299.1 → XP_069043400.1  tight junction protein ZO-2b isoform X3

  2. XM_069187294.1 → XP_069043395.1  tight junction protein ZO-2b isoform X2

  3. XM_069187293.1 → XP_069043394.1  tight junction protein ZO-2b isoform X1

  4. XM_069187300.1 → XP_069043401.1  tight junction protein ZO-2b isoform X7

  5. XM_069187296.1 → XP_069043397.1  tight junction protein ZO-2b isoform X4

  6. XM_069187297.1 → XP_069043398.1  tight junction protein ZO-2b isoform X5

  7. XM_069187298.1 → XP_069043399.1  tight junction protein ZO-2b isoform X6

  8. XM_069187295.1 → XP_069043396.1  tight junction protein ZO-2b isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.