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Gm36411 predicted gene, 36411 [ Mus musculus (house mouse) ]

Gene ID: 102640312, updated on 17-Aug-2024

Summary

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Official Symbol
Gm36411provided by MGI
Official Full Name
predicted gene, 36411provided by MGI
Primary source
MGI:MGI:5595570
See related
AllianceGenome:MGI:5595570
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm36411 in Genome Data Viewer
Location:
11 B1.2; 11
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (49604324..49618477)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (49713472..49727650)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene CCR4-NOT transcription complex, subunit 6 Neighboring gene ribosomal protein L30 pseudogene Neighboring gene predicted gene 12192 Neighboring gene STARR-positive B cell enhancer ABC_E9822 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:49538288-49538489 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:49578193-49578302 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:49585761-49585914 Neighboring gene predicted gene, 36507 Neighboring gene STARR-seq mESC enhancer starr_29382 Neighboring gene glutamine fructose-6-phosphate transaminase 2 Neighboring gene STARR-seq mESC enhancer starr_29384 Neighboring gene mitogen-activated protein kinase 9 Neighboring gene STARR-positive B cell enhancer ABC_E5221

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Global discovery of erythroid long noncoding RNAs reveals novel regulators of red cell maturation. Alvarez-Dominguez JR, et al. Blood, 2014 Jan 23. PMID 24200680, Free PMC Article
  2. Widespread and dynamic translational control of red blood cell development. Alvarez-Dominguez JR, et al. Blood, 2017 Feb 2. PMID 27899360, Free PMC Article
  3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    49604324..49618477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004937244.1 RNA Sequence

  2. XR_388615.5 RNA Sequence

  3. XR_004937246.1 RNA Sequence

  4. XR_004937245.1 RNA Sequence

  5. XR_879826.4 RNA Sequence

  6. XR_879825.4 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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