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Gm35993 predicted gene, 35993 [ Mus musculus (house mouse) ]

Gene ID: 102639757, updated on 22-Oct-2024

Summary

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Official Symbol
Gm35993provided by MGI
Official Full Name
predicted gene, 35993provided by MGI
Primary source
MGI:MGI:5595152
See related
Ensembl:ENSMUSG00000121232 AllianceGenome:MGI:5595152
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in kidney adult (RPKM 3.3), liver adult (RPKM 0.9) and 1 other tissue See more
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Genomic context

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See Gm35993 in Genome Data Viewer
Location:
1 E3; 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (127657031..127660713, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (127729294..127732976, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene mannoside acetylglucosaminyltransferase 5 Neighboring gene STARR-positive B cell enhancer mm9_chr1:129355594-129355895 Neighboring gene predicted gene, 41947 Neighboring gene STARR-positive B cell enhancer ABC_E3299 Neighboring gene STARR-seq mESC enhancer starr_02141 Neighboring gene STARR-positive B cell enhancer ABC_E3300 Neighboring gene transmembrane protein 163 Neighboring gene VISTA enhancer mm790 Neighboring gene STARR-positive B cell enhancer ABC_E9476 Neighboring gene STARR-positive B cell enhancer mm9_chr1:129576446-129576747 Neighboring gene STARR-seq mESC enhancer starr_02145 Neighboring gene RIKEN cDNA 2900009J06 gene Neighboring gene STARR-positive B cell enhancer ABC_E3301 Neighboring gene amino carboxymuconate semialdehyde decarboxylase Neighboring gene cyclin T2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_168316.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC132109
    Related
    ENSMUST00000353799.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    127657031..127660713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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