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Gm35878 predicted gene, 35878 [ Mus musculus (house mouse) ]

Gene ID: 102639606, updated on 17-Aug-2024

Summary

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Official Symbol
Gm35878provided by MGI
Official Full Name
predicted gene, 35878provided by MGI
Primary source
MGI:MGI:5595037
See related
AllianceGenome:MGI:5595037
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in kidney adult (RPKM 1.3), placenta adult (RPKM 0.6) and 1 other tissue See more
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Genomic context

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See Gm35878 in Genome Data Viewer
Location:
11 E2; 11
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (118996668..119000010)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (119105138..119109184)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:118945094-118945295 Neighboring gene STARR-positive B cell enhancer ABC_E5312 Neighboring gene STARR-positive B cell enhancer ABC_E5313 Neighboring gene chromobox 4 Neighboring gene predicted gene, 39482 Neighboring gene STARR-positive B cell enhancer ABC_E7107 Neighboring gene STARR-positive B cell enhancer ABC_E7108 Neighboring gene predicted gene 11754 Neighboring gene STARR-positive B cell enhancer ABC_E7109 Neighboring gene predicted gene 11755 Neighboring gene STARR-positive B cell enhancer ABC_E1853 Neighboring gene TBC1 domain family, member 16 Neighboring gene microRNA 6934

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    118996668..119000010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_389219.4 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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