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Gm10612 predicted gene 10612 [ Mus musculus (house mouse) ]

Gene ID: 102638502, updated on 17-Aug-2024

Summary

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Official Symbol
Gm10612provided by MGI
Official Full Name
predicted gene 10612provided by MGI
Primary source
MGI:MGI:3708796
See related
Ensembl:ENSMUSG00000090174 AllianceGenome:MGI:3708796
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See Gm10612 in Genome Data Viewer
Location:
8 E1; 8 71.95 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (123424598..123426899)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (122697859..122700160)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E1777 Neighboring gene trafficking protein particle complex 2L Neighboring gene poly(A)binding protein nuclear 1-like Neighboring gene microRNA 6396 Neighboring gene CBFA2/RUNX1 translocation partner 3 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:125190682-125190990 Neighboring gene STARR-positive B cell enhancer ABC_E9748 Neighboring gene STARR-positive B cell enhancer ABC_E5048 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:125233759-125233868 Neighboring gene predicted gene, 53467 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:125235898-125236081 Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:125236552-125237022 Neighboring gene RIKEN cDNA C230057M02 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr8:125263004-125263205

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Clone Names

  • AC151999.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_166074.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC151999
    Related
    ENSMUST00000162198.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    123424598..123426899
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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