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Gm10522 predicted gene 10522 [ Mus musculus (house mouse) ]

Gene ID: 102638466, updated on 22-Oct-2024

Summary

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Official Symbol
Gm10522provided by MGI
Official Full Name
predicted gene 10522provided by MGI
Primary source
MGI:MGI:3642357
See related
Ensembl:ENSMUSG00000103676 AllianceGenome:MGI:3642357
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in kidney adult (RPKM 1.9), large intestine adult (RPKM 0.5) and 6 other tissues See more
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Genomic context

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See Gm10522 in Genome Data Viewer
Location:
1; 1 H3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (170811428..170814035)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (170983859..170986466)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene Fc receptor, IgG, low affinity IIb Neighboring gene STARR-seq mESC enhancer starr_03002 Neighboring gene STARR-positive B cell enhancer ABC_E2584 Neighboring gene predicted gene, 34968 Neighboring gene STARR-seq mESC enhancer starr_03005 Neighboring gene STARR-positive B cell enhancer ABC_E10055 Neighboring gene STARR-positive B cell enhancer ABC_E10056 Neighboring gene Fc receptor, IgG, low affinity IV Neighboring gene STARR-positive B cell enhancer ABC_E1235 Neighboring gene predicted gene, 26110 Neighboring gene nuclear encoded tRNA asparagine 6 (anticodon GTT) Neighboring gene predicted gene, 35090

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. USP7 represses lineage differentiation genes in mouse embryonic stem cells by both catalytic and noncatalytic activities. Liu C, et al. Sci Adv, 2023 May 19. PMID 37196079, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    170811428..170814035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_865725.1 RNA Sequence

    Related
    ENSMUST00000340821.1
Nucleotide Protein Strain
Heading Accession and Version

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