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Gm17102 predicted gene 17102 [ Mus musculus (house mouse) ]

Gene ID: 102638296, updated on 2-Nov-2024

Summary

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Official Symbol
Gm17102provided by MGI
Official Full Name
predicted gene 17102provided by MGI
Primary source
MGI:MGI:4937929
See related
Ensembl:ENSMUSG00000091864 AllianceGenome:MGI:4937929
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Is expressed in dorsal root ganglion. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm17102 in Genome Data Viewer
Location:
7 B3; 7 28.25 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (41043122..41046877)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (41393698..41397453)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene zinc finger, MYND-type containing 8 pseudogene 2 Neighboring gene expressed sequence AI987944 Neighboring gene STARR-positive B cell enhancer ABC_E3715 Neighboring gene vomeronasal 2, receptor 57 Neighboring gene STARR-seq mESC enhancer starr_18727 Neighboring gene STARR-seq mESC enhancer starr_18728 Neighboring gene expressed sequence AW146154 Neighboring gene ornithine decarboxylase, structural 1 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. m(6)A-modified lincRNA Dubr is required for neuronal development by stabilizing YTHDF1/3 and facilitating mRNA translation. Huang J, et al. Cell Rep, 2022 Nov 22. PMID 36417851
  2. Global discovery of erythroid long noncoding RNAs reveals novel regulators of red cell maturation. Alvarez-Dominguez JR, et al. Blood, 2014 Jan 23. PMID 24200680, Free PMC Article
  3. Widespread and dynamic translational control of red blood cell development. Alvarez-Dominguez JR, et al. Blood, 2017 Feb 2. PMID 27899360, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_166533.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC137152, AC162792
    Related
    ENSMUST00000277331.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    41043122..41046877
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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