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Gm33588 predicted gene, 33588 [ Mus musculus (house mouse) ]

Gene ID: 102636553, updated on 17-Aug-2024

Summary

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Official Symbol
Gm33588provided by MGI
Official Full Name
predicted gene, 33588provided by MGI
Primary source
MGI:MGI:5592747
See related
AllianceGenome:MGI:5592747
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in bladder adult (RPKM 2.1), genital fat pad adult (RPKM 0.6) and 5 other tissues See more
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Genomic context

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See Gm33588 in Genome Data Viewer
Location:
8 A4; 8
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (34454241..34464532)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (33964213..33974504)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene general transcription factor II E, polypeptide 2 (beta subunit) Neighboring gene STARR-seq mESC enhancer starr_21117 Neighboring gene small integral membrane protein 18 Neighboring gene RNA binding protein gene with multiple splicing Neighboring gene STARR-seq mESC enhancer starr_21127 Neighboring gene VISTA enhancer mm70 Neighboring gene STARR-seq mESC enhancer starr_21144 Neighboring gene STARR-seq mESC enhancer starr_21145 Neighboring gene predicted gene, 51528 Neighboring gene STARR-seq mESC enhancer starr_21150 Neighboring gene STARR-positive B cell enhancer mm9_chr8:35078702-35079003 Neighboring gene STARR-seq mESC enhancer starr_21156 Neighboring gene predicted gene, 39157 Neighboring gene predicted gene, 57792 Neighboring gene predicted gene, 40486 Neighboring gene predicted gene, 40487 Neighboring gene predicted gene 9951

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    34454241..34464532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_378863.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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