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Gm38485 predicted gene, 38485 [ Mus musculus (house mouse) ]

Gene ID: 102636048, updated on 17-Aug-2024

Summary

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Official Symbol
Gm38485provided by MGI
Official Full Name
predicted gene, 38485provided by MGI
Primary source
MGI:MGI:5621370
See related
AllianceGenome:MGI:5621370
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm38485 in Genome Data Viewer
Location:
10 B2; 10
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (42123432..42150198, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (42247436..42274809, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr10:41777238-41777421 Neighboring gene STARR-seq mESC enhancer starr_26475 Neighboring gene predicted gene, 51798 Neighboring gene thymine DNA glycosylase, pseudogene 2 Neighboring gene predicted gene, 40630 Neighboring gene STARR-seq mESC enhancer starr_26478 Neighboring gene forkhead box O3 Neighboring gene STARR-seq mESC enhancer starr_26482 Neighboring gene STARR-seq mESC enhancer starr_26483 Neighboring gene STARR-seq mESC enhancer starr_26484 Neighboring gene CapStarr-seq enhancer MGSCv37_chr10:41989470-41989671 Neighboring gene STARR-positive B cell enhancer ABC_E5129 Neighboring gene AFG1 like ATPase Neighboring gene STARR-seq mESC enhancer starr_26488 Neighboring gene STARR-positive B cell enhancer ABC_E2322 Neighboring gene STARR-seq mESC enhancer starr_26490 Neighboring gene sorting nexin 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    42123432..42150198 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_380269.2 RNA Sequence

  2. XR_001779765.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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