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Gm13201 predicted gene 13201 [ Mus musculus (house mouse) ]

Gene ID: 102634746, updated on 17-Aug-2024

Summary

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Official Symbol
Gm13201provided by MGI
Official Full Name
predicted gene 13201provided by MGI
Primary source
MGI:MGI:3649941
See related
AllianceGenome:MGI:3649941
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in testis adult (RPKM 5.6), ovary adult (RPKM 1.3) and 6 other tissues See more
Orthologs
human all
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Genomic context

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See Gm13201 in Genome Data Viewer
Location:
4 E1; 4 78.67 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (148140315..148160194, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (148057993..148076526, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene natriuretic peptide type A Neighboring gene chloride channel, voltage-sensitive 6 Neighboring gene STARR-seq mESC enhancer starr_12064 Neighboring gene Mthfr promoter region Neighboring gene NSA2 ribosome biogenesis homolog pseudogene Neighboring gene methylenetetrahydrofolate reductase Neighboring gene STARR-positive B cell enhancer ABC_E6283 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 2, pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E4727 Neighboring gene STARR-seq mESC enhancer starr_12067 Neighboring gene STARR-seq mESC enhancer starr_12068 Neighboring gene angiotensin II, type I receptor-associated protein Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:147472153-147472360 Neighboring gene dorsal inhibitory axon guidance protein Neighboring gene MAD2 mitotic arrest deficient-like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    148140315..148160194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004691353.2 RNA Sequence

  2. XR_004691354.2 RNA Sequence

  3. XR_004691352.2 RNA Sequence

  4. XR_004691355.1 RNA Sequence

  5. XR_004942228.1 RNA Sequence

  6. XR_004691356.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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