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Gm16553 predicted gene 16553 [ Mus musculus (house mouse) ]

Gene ID: 102632602, updated on 17-Aug-2024

Summary

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Official Symbol
Gm16553provided by MGI
Official Full Name
predicted gene 16553provided by MGI
Primary source
MGI:MGI:4414973
See related
AllianceGenome:MGI:4414973
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in spleen adult (RPKM 1.9), liver adult (RPKM 0.7) and 6 other tissues See more
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Genomic context

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See Gm16553 in Genome Data Viewer
Location:
8 A1.1; 8 1.92 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (3759484..3789993)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (3709482..3739993)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene 45231 Neighboring gene trafficking protein particle complex 5 Neighboring gene Fc receptor, IgE, low affinity II, alpha polypeptide Neighboring gene C-type lectin domain family 4, member g Neighboring gene STARR-positive B cell enhancer mm9_chr8:3718569-3718869 Neighboring gene CD209a antigen Neighboring gene STARR-seq mESC enhancer starr_20597 Neighboring gene ribonuclease P RNA-like 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • AC087183.3

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    3759484..3789993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_378683.5 RNA Sequence

  2. XR_378682.5 RNA Sequence

  3. XR_003947358.2 RNA Sequence

  4. XR_378680.5 RNA Sequence

  5. XR_001778493.3 RNA Sequence

  6. XR_870095.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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