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LOC102631245 putative callose synthase 8 [ Citrus sinensis (sweet orange) ]

Gene ID: 102631245, updated on 23-Nov-2023

Summary

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Gene symbol
LOC102631245
Gene description
putative callose synthase 8
Locus tag
KPL70_007186
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC102631245 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
41
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 3 NC_068558.1 (14739297..14755434, complement)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 5 NC_023050.1 (12747400..12763568)

Chromosome 3 - NC_068558.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112498228 Neighboring gene C2 domain-containing protein At1g53590 Neighboring gene pentatricopeptide repeat-containing protein At3g14580, mitochondrial Neighboring gene pentatricopeptide repeat-containing protein At1g53600, mitochondrial Neighboring gene receptor-like protein 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative callose synthase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068558.1 Reference DVS_A1.0 Primary Assembly

    Range
    14739297..14755434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006477876.3 → XP_006477939.2  putative callose synthase 8 isoform X2

  2. XM_006477875.3 → XP_006477938.2  putative callose synthase 8 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases