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LOC102631100 beta-glucosidase-like SFR2, chloroplastic [ Citrus sinensis (sweet orange) ]

Gene ID: 102631100, updated on 10-Oct-2024

Summary

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Gene symbol
LOC102631100
Gene description
beta-glucosidase-like SFR2, chloroplastic
Locus tag
KPL70_002154
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC102631100 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 1 NC_068556.1 (24308819..24314156, complement)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 9 NC_023054.1 (550395..555352)

Chromosome 1 - NC_068556.1Genomic Context describing neighboring genes Neighboring gene F-box protein At5g49610 Neighboring gene uncharacterized LOC102606701 Neighboring gene uncharacterized LOC102630897 Neighboring gene gibberellin 2-beta-dioxygenase 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-glucosidase-like SFR2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068556.1 Reference DVS_A1.0 Primary Assembly

    Range
    24308819..24314156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052440964.1 → XP_052296924.1  beta-glucosidase-like SFR2, chloroplastic isoform X3

  2. XM_006488732.2 → XP_006488795.1  beta-glucosidase-like SFR2, chloroplastic isoform X1

    UniProtKB/TrEMBL
    A0A067FXB1
    Conserved Domains (1) summary
    COG2723
    Location:169 → 551
    BglB; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]

  3. XM_006488733.2 → XP_006488796.1  beta-glucosidase-like SFR2, chloroplastic isoform X2

    UniProtKB/TrEMBL
    A0A067FXF8
    Conserved Domains (1) summary
    COG2723
    Location:169 → 550
    BglB; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
Nucleotide Protein
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