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LOC102630426 hypothetical protein [ Citrus sinensis (sweet orange) ]

Gene ID: 102630426, updated on 23-Nov-2023

Summary

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Gene symbol
LOC102630426
Gene description
hypothetical protein
Locus tag
KPL70_014318
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC102630426 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 5 NC_068560.1 (14069437..14074016)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) Unplaced Scaffold NW_006257128.1 (389852..394460)

Chromosome 5 - NC_068560.1Genomic Context describing neighboring genes Neighboring gene NADPH:quinone oxidoreductase Neighboring gene uncharacterized LOC127902267 Neighboring gene aspartyl protease AED3 Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-arabinosyltransferase RDN2
Names
Hydroxyproline O-arabinosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068560.1 Reference DVS_A1.0 Primary Assembly

    Range
    14069437..14074016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006494011.3 → XP_006494074.2  hydroxyproline O-arabinosyltransferase RDN2

  2. XM_052442318.1 → XP_052298278.1  hydroxyproline O-arabinosyltransferase RDN2

  3. XM_052442320.1 → XP_052298280.1  hydroxyproline O-arabinosyltransferase RDN2

  4. XM_006494014.4 → XP_006494077.2  hydroxyproline O-arabinosyltransferase RDN2

  5. XM_025093804.2 → XP_024949572.2  hydroxyproline O-arabinosyltransferase RDN2

  6. XM_006494012.4 → XP_006494075.2  hydroxyproline O-arabinosyltransferase RDN2

  7. XM_052442319.1 → XP_052298279.1  hydroxyproline O-arabinosyltransferase RDN2

  8. XM_052442317.1 → XP_052298277.1  hydroxyproline O-arabinosyltransferase RDN2

Nucleotide Protein
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