U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC102618433 xyloglucan 6-xylosyltransferase 2 [ Citrus sinensis (sweet orange) ]

Gene ID: 102618433, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC102618433
Gene description
xyloglucan 6-xylosyltransferase 2
Locus tag
KPL70_009633
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC102618433 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 3 NC_068558.1 (45147457..45151295)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 5 NC_023050.1 (34085469..34089316)

Chromosome 3 - NC_068558.1Genomic Context describing neighboring genes Neighboring gene dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase Neighboring gene translocator protein homolog Neighboring gene uncharacterized LOC102619115 Neighboring gene stress-related protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xyloglucan 6-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xyloglucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
xyloglucan 6-xylosyltransferase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068558.1 Reference DVS_A1.0 Primary Assembly

    Range
    45147457..45151295
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025098444.2 → XP_024954212.1  xyloglucan 6-xylosyltransferase 2 isoform X3

    Conserved Domains (1) summary
    PLN03182
    Location:1 → 444
    PLN03182; xyloglucan 6-xylosyltransferase; Provisional

  2. XM_006479858.4 → XP_006479921.1  xyloglucan 6-xylosyltransferase 2 isoform X1

    Conserved Domains (1) summary
    PLN03182
    Location:1 → 453
    PLN03182; xyloglucan 6-xylosyltransferase; Provisional

  3. XM_006479859.3 → XP_006479922.1  xyloglucan 6-xylosyltransferase 2 isoform X2

    See identical proteins and their annotated locations for XP_006479922.1

    UniProtKB/TrEMBL
    A0A067H5K9
    Conserved Domains (1) summary
    PLN03182
    Location:1 → 453
    PLN03182; xyloglucan 6-xylosyltransferase; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases