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LOC102617379 uncharacterized LOC102617379 [ Citrus sinensis (sweet orange) ]

Gene ID: 102617379, updated on 23-Nov-2023

Summary

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Gene symbol
LOC102617379
Gene description
uncharacterized LOC102617379
Locus tag
KPL70_000543
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC102617379 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 1 NC_068556.1 (4302859..4306338)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 4 NC_023049.1 (17817028..17820725, complement)

Chromosome 1 - NC_068556.1Genomic Context describing neighboring genes Neighboring gene zinc finger BED domain-containing protein RICESLEEPER 1-like Neighboring gene zinc finger BED domain-containing protein RICESLEEPER 3-like Neighboring gene topless-related protein 4 Neighboring gene BRAP2 RING ZnF UBP domain-containing protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC102617379
Names
Beta-1,4-N-acetylglucosaminyltransferase family protein
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068556.1 Reference DVS_A1.0 Primary Assembly

    Range
    4302859..4306338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006475829.4 → XP_006475892.1  uncharacterized protein LOC102617379

    See identical proteins and their annotated locations for XP_006475892.1

    UniProtKB/TrEMBL
    A0A067GNE6
    Conserved Domains (1) summary
    pfam04724
    Location:26 → 372
    Glyco_transf_17; Glycosyltransferase family 17
Nucleotide Protein
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