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LOC102616413 conserved oligomeric Golgi complex subunit 5 [ Citrus sinensis (sweet orange) ]

Gene ID: 102616413, updated on 23-Nov-2023

Summary

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Gene symbol
LOC102616413
Gene description
conserved oligomeric Golgi complex subunit 5
Locus tag
KPL70_012109
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC102616413 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 4 NC_068559.1 (19124798..19130052, complement)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 7 NC_023052.1 (13191159..13196447)

Chromosome 4 - NC_068559.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102617002 Neighboring gene GDSL esterase/lipase At4g10955 Neighboring gene uncharacterized LOC112498833 Neighboring gene phenylalanine N-monooxygenase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068559.1 Reference DVS_A1.0 Primary Assembly

    Range
    19124798..19130052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006484833.4 → XP_006484896.1  conserved oligomeric Golgi complex subunit 5

    UniProtKB/TrEMBL
    A0A067ELT4
    Conserved Domains (1) summary
    pfam10392
    Location:85 → 183
    COG5; Golgi transport complex subunit 5
Nucleotide Protein
Heading Accession and Version

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