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LOC102615235 sulfoquinovosyl transferase SQD2 [ Citrus sinensis (sweet orange) ]

Gene ID: 102615235, updated on 23-Nov-2023

Summary

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Gene symbol
LOC102615235
Gene description
sulfoquinovosyl transferase SQD2
Locus tag
KPL70_017873
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC102615235 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 6 NC_068561.1 (16162130..16168210, complement)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 6 NC_023051.1 (9809690..9815822, complement)

Chromosome 6 - NC_068561.1Genomic Context describing neighboring genes Neighboring gene transcription factor DIVARICATA Neighboring gene uncharacterized acetyltransferase At3g50280 Neighboring gene josephin-like protein Neighboring gene putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068561.1 Reference DVS_A1.0 Primary Assembly

    Range
    16162130..16168210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006480910.4 → XP_006480973.1  sulfoquinovosyl transferase SQD2

    Conserved Domains (2) summary
    cd03814
    Location:120 → 485
    GT1_like_2; This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can ...
    PLN02871
    Location:71 → 525
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Nucleotide Protein
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