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LOC102614913 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A [ Citrus sinensis (sweet orange) ]

Gene ID: 102614913, updated on 23-Nov-2023

Summary

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Gene symbol
LOC102614913
Gene description
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
Locus tag
KPL70_000838
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC102614913 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
23
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 1 NC_068556.1 (7456064..7465546, complement)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) Unplaced Scaffold NW_006257140.1 (83637..93819)

Chromosome 1 - NC_068556.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene protein unc-13 homolog Neighboring gene 60S acidic ribosomal protein P2B-like Neighboring gene protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068556.1 Reference DVS_A1.0 Primary Assembly

    Range
    7456064..7465546 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006494250.4 → XP_006494313.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A

    See identical proteins and their annotated locations for XP_006494313.1

    UniProtKB/TrEMBL
    A0A067FSS9, A0A067FTH8
    Conserved Domains (1) summary
    cl21590
    Location:19 → 433
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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