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LOC102614218 ABC transporter B family member 1 [ Citrus sinensis (sweet orange) ]

Gene ID: 102614218, updated on 23-Nov-2023

Summary

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Gene symbol
LOC102614218
Gene description
ABC transporter B family member 1
Locus tag
KPL70_017328
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC102614218 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 6 NC_068561.1 (8755984..8763740)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) Unplaced Scaffold NW_006257076.1 (1863411..1871131)

Chromosome 6 - NC_068561.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102612726 Neighboring gene uncharacterized LOC127902953 Neighboring gene uncharacterized LOC102614507 Neighboring gene putative pentatricopeptide repeat-containing protein At3g23330

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ABC transporter B family member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068561.1 Reference DVS_A1.0 Primary Assembly

    Range
    8755984..8763740
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006491638.4 → XP_006491701.1  ABC transporter B family member 1

    See identical proteins and their annotated locations for XP_006491701.1

    UniProtKB/TrEMBL
    A0A067EKJ2
    Conserved Domains (3) summary
    cd03249
    Location:428 → 667
    ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
    PTZ00265
    Location:103 → 1323
    PTZ00265; multidrug resistance protein (mdr1); Provisional
    pfam00664
    Location:109 → 379
    ABC_membrane; ABC transporter transmembrane region
Nucleotide Protein
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