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LOC102613765 arabinosyltransferase XEG113 [ Citrus sinensis (sweet orange) ]

Gene ID: 102613765, updated on 23-Nov-2023

Summary

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Gene symbol
LOC102613765
Gene description
arabinosyltransferase XEG113
Locus tag
KPL70_018995
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC102613765 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 6 NC_068561.1 (24267712..24273372)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 6 NC_023051.1 (19242889..19248579)

Chromosome 6 - NC_068561.1Genomic Context describing neighboring genes Neighboring gene abscisic acid 8'-hydroxylase 1-like Neighboring gene pto-interacting protein 1-like Neighboring gene pentatricopeptide repeat-containing protein At4g19220, mitochondrial Neighboring gene ABC transporter E family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arabinosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall pectin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arabinosyltransferase XEG113
Names
pentatricopeptide repeat-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068561.1 Reference DVS_A1.0 Primary Assembly

    Range
    24267712..24273372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006482289.3 → XP_006482352.1  arabinosyltransferase XEG113

    UniProtKB/TrEMBL
    A0A067GA74
    Conserved Domains (1) summary
    pfam03407
    Location:152 → 378
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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