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LOC102612131 callose synthase 9 [ Citrus sinensis (sweet orange) ]

Gene ID: 102612131, updated on 23-Nov-2023

Summary

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Gene symbol
LOC102612131
Gene description
callose synthase 9
Locus tag
KPL70_002401
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC102612131 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
52
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 2 NC_068557.1 (1205699..1233173, complement)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) Unplaced Scaffold NW_006257092.1 (204360..231984)

Chromosome 2 - NC_068557.1Genomic Context describing neighboring genes Neighboring gene probable plastid-lipid-associated protein 12, chloroplastic Neighboring gene uncharacterized LOC102613141 Neighboring gene callose synthase 3 Neighboring gene uncharacterized LOC127900372

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068557.1 Reference DVS_A1.0 Primary Assembly

    Range
    1205699..1233173 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006492604.4 → XP_006492667.1  callose synthase 9

    See identical proteins and their annotated locations for XP_006492667.1

    UniProtKB/TrEMBL
    A0A067EMU8, A0A067EYW5
    Conserved Domains (2) summary
    pfam02364
    Location:1026 → 1766
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:338 → 446
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases