U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC102610467 mannosyltransferase APTG1 [ Citrus sinensis (sweet orange) ]

Gene ID: 102610467, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC102610467
Gene description
mannosyltransferase APTG1
Locus tag
KPL70_027648
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC102610467 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 9 NC_068564.1 (32860318..32864438)
102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 4 NC_023049.1 (1204212..1208313, complement)

Chromosome 9 - NC_068564.1Genomic Context describing neighboring genes Neighboring gene probable E3 ubiquitin-protein ligase XBOS32 Neighboring gene RING-H2 finger protein ATL13 Neighboring gene uncharacterized LOC102610158 Neighboring gene VAN3-binding protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mannosyltransferase APTG1
Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068564.1 Reference DVS_A1.0 Primary Assembly

    Range
    32860318..32864438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006474036.4 → XP_006474099.1  mannosyltransferase APTG1 isoform X1

    See identical proteins and their annotated locations for XP_006474099.1

    UniProtKB/TrEMBL
    A0A067F4Q0
    Conserved Domains (1) summary
    cl21590
    Location:23 → 531
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_025097912.2 → XP_024953680.1  mannosyltransferase APTG1 isoform X2

    UniProtKB/TrEMBL
    A0A067F4T8
    Conserved Domains (1) summary
    cl21590
    Location:23 → 504
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases