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LOC102605956 probable beta-1,3-galactosyltransferase 2 [ Solanum tuberosum (potato) ]

Gene ID: 102605956, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102605956
Gene description
probable beta-1,3-galactosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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See LOC102605956 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239511.1 (96345..100791, complement)

NW_006239511.1Genomic Context describing neighboring genes Neighboring gene putative late blight resistance protein homolog R1A-3 Neighboring gene putative late blight resistance protein homolog R1B-16 Neighboring gene CASP-like protein 2D1 Neighboring gene ATP synthase gamma chain, chloroplastic-like Neighboring gene AUGMIN subunit 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239511.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239511.1 Reference SolTub_3.0 Primary Assembly

    Range
    96345..100791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006365897.2 → XP_006365959.1  probable beta-1,3-galactosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    M1CP39
    Conserved Domains (3) summary
    PLN03193
    Location:6 → 395
    PLN03193; beta-1,3-galactosyltransferase; Provisional
    pfam13334
    Location:19 → 100
    DUF4094; Domain of unknown function (DUF4094)
    cl21608
    Location:140 → 338
    Galactosyl_T; Galactosyltransferase

  2. XM_015304667.1 → XP_015160153.1  probable beta-1,3-galactosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    M1CP39
    Conserved Domains (3) summary
    PLN03193
    Location:6 → 396
    PLN03193; beta-1,3-galactosyltransferase; Provisional
    pfam13334
    Location:19 → 101
    DUF4094; Domain of unknown function (DUF4094)
    cl21608
    Location:141 → 339
    Galactosyl_T; Galactosyltransferase

  3. XM_015304668.1 → XP_015160154.1  probable beta-1,3-galactosyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    M1CP37
    Conserved Domains (2) summary
    pfam13334
    Location:9 → 26
    DUF4094; Domain of unknown function (DUF4094)
    cl21608
    Location:66 → 264
    Galactosyl_T; Galactosyltransferase

  4. XM_015304670.1 → XP_015160156.1  probable beta-1,3-galactosyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    M1CP37
    Conserved Domains (2) summary
    pfam13334
    Location:9 → 26
    DUF4094; Domain of unknown function (DUF4094)
    cl21608
    Location:66 → 264
    Galactosyl_T; Galactosyltransferase

  5. XM_015304669.1 → XP_015160155.1  probable beta-1,3-galactosyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    M1CP37
    Conserved Domains (2) summary
    pfam13334
    Location:9 → 26
    DUF4094; Domain of unknown function (DUF4094)
    cl21608
    Location:66 → 264
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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