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LOC102603568 probable galacturonosyltransferase 12 [ Solanum tuberosum (potato) ]

Gene ID: 102603568, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102603568
Gene description
probable galacturonosyltransferase 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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See LOC102603568 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239238.1 (121779..124996)

NW_006239238.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102602889 Neighboring gene U4/U6 small nuclear ribonucleoprotein Prp31-like Neighboring gene autophagy-related protein 18f Neighboring gene transcription factor ILR3 Neighboring gene kinesin-3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239238.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239238.1 Reference SolTub_3.0 Primary Assembly

    Range
    121779..124996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006360035.2 → XP_006360097.1  probable galacturonosyltransferase 12

    UniProtKB/TrEMBL
    M1BNU2
    Conserved Domains (2) summary
    cd06429
    Location:211 → 523
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02659
    Location:5 → 537
    PLN02659; Probable galacturonosyltransferase
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases