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LOC102602725 callose synthase 7-like [ Solanum tuberosum (potato) ]

Gene ID: 102602725, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102602725
Gene description
callose synthase 7-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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See LOC102602725 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
43
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239028.1 (1588696..1616961)

NW_006239028.1Genomic Context describing neighboring genes Neighboring gene probable WRKY transcription factor 71 Neighboring gene probable receptor-like protein kinase At2g42960 Neighboring gene GDSL esterase/lipase At4g10955-like Neighboring gene uncharacterized LOC102603394

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239028.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239028.1 Reference SolTub_3.0 Primary Assembly

    Range
    1588696..1616961
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006348897.2 → XP_006348959.1  callose synthase 7-like isoform X1

    Conserved Domains (3) summary
    pfam02364
    Location:1031 → 1774
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:58 → 180
    Vta1; Vta1 like
    pfam14288
    Location:338 → 438
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  2. XM_015309416.1 → XP_015164902.1  callose synthase 7-like isoform X2

    Conserved Domains (2) summary
    pfam02364
    Location:762 → 1499
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:69 → 169
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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