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LOC102601663 alpha-galactosidase 1-like [ Solanum tuberosum (potato) ]

Gene ID: 102601663, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102601663
Gene description
alpha-galactosidase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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See LOC102601663 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239256.1 (520597..524867)

NW_006239256.1Genomic Context describing neighboring genes Neighboring gene transcription elongation factor SPT4 homolog 2-like Neighboring gene pyruvate kinase Neighboring gene katanin p80 WD40 repeat-containing subunit B1 homolog Neighboring gene histone acetyltransferase KAT6B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239256.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-galactosidase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239256.1 Reference SolTub_3.0 Primary Assembly

    Range
    520597..524867
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006360793.1 → XP_006360855.1  alpha-galactosidase 1-like

    UniProtKB/TrEMBL
    M1CDE0
    Conserved Domains (2) summary
    PLN02692
    Location:1 → 418
    PLN02692; alpha-galactosidase
    cl07893
    Location:50 → 416
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases