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LOC102600909 glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic [ Solanum tuberosum (potato) ]

Gene ID: 102600909, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102600909
Gene description
glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Also known as
agpS2
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Genomic context

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See LOC102600909 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239009.1 (1324733..1330455)

NW_006239009.1Genomic Context describing neighboring genes Neighboring gene inositol-pentakisphosphate 2-kinase-like Neighboring gene uncharacterized LOC107060457 Neighboring gene uncharacterized LOC107060458 Neighboring gene protein RER1B-like Neighboring gene uncharacterized LOC107060459

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239009.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning and characterization of novel isoforms of potato ADP-glucose pyrophosphorylase. La Cognata U, et al. Mol Gen Genet, 1995 Mar 10. PMID 7700228

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucose-1-phosphate adenylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic
Names
ADP-glucose pyrophosphorylase
ADP-glucose synthase
AGPase S
Alpha-D-glucose-1-phosphate adenyl transferase
XP_006346702.1
XP_015163910.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001318669.1 → NP_001305598.1  glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic

    Status: PROVISIONAL

    Source sequence(s)
    X74982
    UniProtKB/Swiss-Prot
    P55242
    Conserved Domains (3) summary
    cd04651
    Location:387 → 513
    LbH_G1P_AT_C; Glucose-1-phosphate adenylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Glucose-1-phosphate adenylyltransferase is also known as ADP-glucose synthase or ADP-glucose pyrophosphorylase. It catalyzes the first committed and ...
    PLN02241
    Location:85 → 519
    PLN02241; glucose-1-phosphate adenylyltransferase
    pfam00483
    Location:91 → 364
    NTP_transferase; Nucleotidyl transferase

RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239009.1 Reference SolTub_3.0 Primary Assembly

    Range
    1324733..1330455
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015308424.1 → XP_015163910.1  glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic

    UniProtKB/TrEMBL
    M1BB30
    Conserved Domains (1) summary
    PLN02241
    Location:85 → 521
    PLN02241; glucose-1-phosphate adenylyltransferase

  2. XM_006346640.2 → XP_006346702.1  glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic

    Conserved Domains (1) summary
    PLN02241
    Location:85 → 521
    PLN02241; glucose-1-phosphate adenylyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P55242.1 GenPept UniProtKB/Swiss-Prot:P55242

Gene LinkOut

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Molecular Biology Databases