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LOC102598240 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 [ Solanum tuberosum (potato) ]

Gene ID: 102598240, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102598240
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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See LOC102598240 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239298.1 (43867..47364, complement)

NW_006239298.1Genomic Context describing neighboring genes Neighboring gene carboxy-terminal kinesin 2 Neighboring gene mitogen-activated protein kinase kinase kinase NPK1-like Neighboring gene putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 Neighboring gene probable pectinesterase/pectinesterase inhibitor 25

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239298.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239298.1 Reference SolTub_3.0 Primary Assembly

    Range
    43867..47364 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006361836.1 → XP_006361898.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4

    UniProtKB/TrEMBL
    M1BMZ8
    Conserved Domains (1) summary
    cd02537
    Location:269 → 505
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
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